fun.imagej.imp.roi
angles
(angles rois)
Get the angles of each ROI.
area
(area roi)
Compute the area of an roi using an integer grid + tally mechanism.
clear-outside-roi
(clear-outside-roi imp roi)
Clear the image outside the roi. Set the background color beforehand
clear-roi
(clear-roi imp roi)
Clear the image outside the roi. Set the background color beforehand
ferets-diameter
(ferets-diameter roi)
Return Feret's diameter for each ROI. This is the greatest distance between any 2 points along the perimeter/ROI boundary.
ferets-diameters
(ferets-diameters rois)
Return Feret's diameter for each ROI. This is the greatest distance between any 2 points along the perimeter/ROI boundary.
fill-rois
(fill-rois imp rois)(fill-rois imp rois colors)
Fill ROIs, colors should by the same format as imp, which probably has to be single channel at the moment.
fill-rois-convex-hull
(fill-rois-convex-hull imp rois colors)
Fill ROIs, colors should by the same format as imp, which probably has to be single channel at the moment.
get-roi-manager
(get-roi-manager)
Get the current ROI manager.
make-oval
(make-oval x y w h)
make-rectangle
(make-rectangle x y w h)
mask-from-roi-manager
(mask-from-roi-manager roi-manager imp)
Make a mask ImagePlus from all the rois in roi-manager.
open-roi
(open-roi filename)
Open an ROI from filename
overlaps?
(overlaps? roi-a roi-b)
perimeter-length
(perimeter-length roi)
Return the perimeter length of each ROI.
perimeter-lengths
(perimeter-lengths rois)
Return the perimeter length of each ROI.
poly-area
(poly-area poly)
Return the area of a polygon.